Processing Volumetric Data

After collecting volumetric data with the Optotune you can now process your data as follows. First, use sbxsplit() to generate separate data files for each “slice” of the optotune. For example, if I have a data file gn7_008_001.sbx collected some data with an optotune waveform having a period of 5 the command will generate a…

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An extremely simple deconvolution algorithm

A number of sophisticated deconvolution algorithms have been proposed in the literature, most of which involve solving an optimization problem. While trying to develop a fast, on-line spike detection algorithm for Scanbox I tried a simple idea that seems to work reasonably well and the resulting algorithm is trivial. In all likelihood this must have been published somewhere.  If…

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