Santiago Jaramillo, one of our colleagues at the University of Oregon, has written pyscanbox, a public, lightweight Python/Qt interface for Neurolabware microscopes. The interface is designed to replicate in large part the Scanbox GUI, offering users who prefer a Python interface rather than Matlab. For a full list of which features are supported by his…
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Sbxsegmenttool: A simple GUI for off-line segmentation
Sbxsegmenttool is a simple GUI that replicates the same mechanism used in Scanbox’s online segmentation to assist in the segmentation of cells and/or processes in data that has already been collected. Sbxsegmenttool expects the images to have already been rigidly aligned. After loading an *.align file, the mean mean aligned image will be shown momentarily and then replaced by a…
Read MoreA Quick Look at Scanbox’s GUI
In case you were wondering, this is how things look for now in the first release of Scanbox 1.0. Click on the figure to get a larger picture. Here is a brief description of the panels. Chameleon: it allow you to change the laser wavelength, power and read out the laser status. Scanner: Defines scanning parameters including the…
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Scanbox 