Online trial averaging

It is often the case that you may want to do some quick on-line analyses on our data during the execution of an experiment.  Scanbox provides a quick way to save, at the end of each experiment, the mean image during each trial.  To use this feature do the following: Select “Accumulate” in the Image…

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Recursive Image Alignment and Statistics

If it is awake, it will move.  And if it moves, your images are likely to do it too.  This means that, almost surely, the first step in processing your data will be to align (or register) all the images in the sequence. This is such a basic problem that there are probably as many solutions…

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